This repository provides a comprehensive and reproducible suite of R scripts for analyzing Spatial Transcriptomics (ST) data. It compares the performance and results of Seurat and Giotto, and ...
This useful study provides a spatial transcriptomic analysis of the mouse adrenal gland that could have implications for future research and applications. The authors present solid results that allow ...
Called SOAR (Spatial transcriptOmics Analysis Resource), the now-live platform is a one-stop shop that helps scientists explore how genes behave differently in various parts of the body, shows them ...
Introduction: In the United States, 50-80% of chronic kidney disease (CKD) patients use a central venous catheter (CVC) for hemodialysis. Protracted exposure of CVCs against fragile venous walls ...
Immune low-response states significantly impact the effectiveness of immunotherapy in cancer treatment. These states ...
This figure shows how the STAIG framework can successfully identify spatial domains by integrating image processing and contrastive learning to analyze spatial transcriptomics data effectively.
Biological tissues are made up of different cell types arranged in specific patterns, which are essential to their proper functioning. Understanding these spatial arrangements is important when ...
04.11.24 Analysis made with automated script in a platform do not include the padj value in the filtering step. When we apply padj filter there are only few dizaines genes are signinficant. If we ...
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